%0 Journal Article
%T Ranking network mechanisms by how they fit diverse experiments and deciding on E. coli's ammonium transport and assimilation network
%A Fred C. Boogerd
%A Hans V. Westerhoff
%A Hiroyuki Kurata
%A Kazuhiro Maeda
%J Archive of "NPJ Systems Biology and Applications".
%D 2019
%R 10.1038/s41540-019-0091-6
%X Schematic diagram of the E. coli ammonium transport and assimilation network. For simplicity, CADLIVE notation14,24,25 was used. Blue lines: activation, red lines: inhibition, green lines: catalytic action. The thick grey line indicates cytoplasmic membrane. The following abbreviations were used. GS: glutamine synthetase, GDH: glutamate dehydrogenase, GOGAT: glutamate synthase, ATase: adenylyltransferase/adenylyl-removing enzyme, UTase: uridylyltransferase/uridylyl-removing enzyme, GlnB and GlnK: nitrogen regulatory proteins, AmtB: ammonium transporter, OG: 2-oxoglutarate, GLU: glutamate, GLN: glutamin
%U https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6461619/