%0 Journal Article %T Automated partial atomic charge assignment for drug-like molecules: a fast knapsack approach %A Alan E. Mark %A Bertrand Caron %A Daan P. Geerke %A Gunnar W. Klau %A Lourens Veen %A Martin S. Engler %J Archive of "Algorithms for Molecular Biology : AMB". %D 2019 %R 10.1186/s13015-019-0138-7 %X Informally, the k-neighbourhood of an atom v is the set of all atoms for which a path of length ¡Ü k to v exists. Let G [ N k ( v ) ] be the subgraph induced by the k-neighbourhood of v %K Multiple-choice knapsack %K Integer Linear Programming %K Pseudo-polynomial Dynamic Programming %K Partial charge assignment %K Molecular dynamics simulations %U https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6364451/