%0 Journal Article %T Detecting Perfect Transmission in Josephson Junctions on the Surface of Three Dimensional Topological Insulators %A Roni Ilan %A Jens H. Bardarson %A H. -S. Sim %A Joel E. Moore %J Physics %D 2013 %I arXiv %R 10.1088/1367-2630/16/5/053007 %X We consider Josephson junctions on surfaces of three dimensional topological insulator nanowires. We find that in the presence of a parallel magnetic field, short junctions on nanowires show signatures of a perfectly transmitted mode capable of supporting Majorana fermions. Such signatures appear in the current-phase relation in the presence or absence of the fermion parity anomaly, and are most striking when considering the critical current as a function of flux \Phi, which exhibits a peak at \Phi=h/2e. The peak sharpens in the presence of disorder at low but finite chemical potentials, and can be easily disentangled from weak-antilocalization effects. The peak also survives at small but finite temperatures, and represents a realistic and robust hallmark for perfect transmission and the emergence of Majorana physics inside the wire. %U http://arxiv.org/abs/1305.2210v1