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Benign Breast Tumors among Senegalese Women: Diversity and Genetic Evolution of D-Loop

DOI: 10.4236/oalib.1101758, PP. 1-6

Subject Areas: Genetics

Keywords: Tumor, Benign, Breast Cancer, D-Loop, Diversity, Genetic Evolution, Senegal

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Abstract

Subsaharan Africa, as in Senegal, breast cancer is the second after that of cervical in women. However, although most of the studies on breast pathology for cancer, the overwhelming majority of breast lesions, palpable or not are benign and some of them can become cancerous. So this research is done to understand the impact of diversity and genetic evolution of the D-loop in benign breast lesions in senegalese women. The variability of the D-loop was investigated by PCR-sequencing, in twenty eight patients with benign breast tumor. The results revealed a significant presence of specific variants for breast benign tissue, as well as control tissues. The C150T mutation was associated with protection to the presence of benign breast tumors and G247A mutation implicated in an increased risk. Patients of mitochondrial haplogroup L would be significantly more susceptible to these benign breast lesions. And the study of the genetic evolution of breast benign tumors revealed that the D-Loop is not under selection. Finally, a significant correlation was associated with haplotypes C309CC and witnessed the D310, which respectively constitute increased risk groups and susceptible to the contraction of benign breast lesions. All these results allowed to have a global view on the influence of pathogenic mutations on diversity and genetic evolution of the D-Loop observed in senegalese patients with benign breast tumor.

Cite this paper

Doupa, D. , Noë, M. , Badji, L. , Mbaye, F. , Ka, S. , Dem, A. , Kane, M. , Mbacké, Sembè and ne (2015). Benign Breast Tumors among Senegalese Women: Diversity and Genetic Evolution of D-Loop. Open Access Library Journal, 2, e1758. doi: http://dx.doi.org/10.4236/oalib.1101758.

References

[1]  Ly, M., Antoine, M., André, F., Callard, P., Bernaudin, J.F. and Diallo, D.A. (2011) Le cancer du sein chez la femme de l’Afrique sub-saharienne: Etat actuel des connaissances. Bulletin du Cancer, 98, 797-806.
[2]  Badid, N. (2012) Stress oxydatif et profil nutritionnel chez une population de femmes atteintes de cancer du sein dans la région de Tlemcen. Thèse Université Abou Bekr Belkaid Tlemcen, Algérie, 200 p.
[3]  Boisvert, G. (2013) Les lésions bénignes du sein. Spécial cancer du sein. Le patient, 7, 38-41.
[4]  Chauvet, M.P., Jafari, M., Lambaudie, E. and Giard, S. (2006) Benign Tumors and Complex Lesions: Surgeon’s Point of View. 28èmes journées de la Société francaise de sénologie et de pathologie mammaire (SFSPM), Lille, 355-360.
[5]  www.lemonde.fr 
[6]  www.novartis.fr/ 
[7]  Picard, S.F. (2003) Role de l'instabilité génétique dans la réponse aux traitements dans une population de cancers du sein localement avancés et traités par chimiothérapie première. Mémoire école pratique des hautes études, France, 41 p.
[8]  www.larousse.fr
[9]  Mbaye, F., Dem, A., Fall, M. and Sembène, M. (2012) Implication of the Cytochrome Bull Nucleotide and Protein Mutations in the Occurrence of Breast Cancer in Senegal. International Journal of Applied Biology and Pharmaceutical Technology, 3, 107-114.
[10]  Hall, T. (2001) BioEdit Version 5.0.6. North Carolina State University, Raleigh.
[11]  Thompson, J.D., Higgins, D.G. and Gibson, T.J. (1994) CLUSTAL W: Improving the Sensitivity of Progressive Multiple Sequence Alignment through Sequence Weighting, Position-Specific Gap Penalties and Weight Matrix Choice. Nucleic Acids Research, 22, 4673-4680.
http://dx.doi.org/10.1093/nar/22.22.4673
[12]  Long, F. and Yong-Gang, Y. (2013) An Update to MitoTool: Using a New Scoring System for Faster mtDNA Haplogroup Determination. Mitochondrion, 13, 360-363.
http://dx.doi.org/10.1016/j.mito.2013.04.011
[13]  www.mitomap.org/mitoseq.html.
[14]  Coudray, C., Torroni, A., Achilli, A., Pala, M., Olivieri, A., Larrouy, G. and Dugoujon, J.M. (2009) Les lignées mitochondriales et l’histoire génétique des populations berbérophones du nord de l’Afrique. Antropo, 18, 63-72.
www.didac.ehu.es/antropo
[15]  Tamura, K., Stecher, G., Peterson, D., Filipski, A. and Kumar, S. (2013) MEGA 6: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods. Molecular Biology and Evolution, 30, 2725-2729.
http://dx.doi.org/10.1093/molbev/mst197
[16]  Excoffier, L., Laval, G. and Schneider, S. (2005) Arlequin Version 3.0: An Integrated Software Package for Population Genetics Data Analysis. Evolutionary Bioinformatics Online, 1, 47-50.
[17]  Chen, Y.-S., Torroni, A., Excoffier, L., Santachiara-Benerecetti, A.S. and Wallace, D.C. (1995) Analysis of mtDNA Variation in African Populations Reveals the Most Ancient of All Human Continent Specific Haplogroups. American Journal Human Genetics, 57, 133-149.
[18]  Rozas, J., Librado, P., Sánchez-Del Barrio, J.C., Messeguer, X. and Rozas, R. (2010) DnaSP Version 5 Help Contents (Help File).
http://www.ub.edu/dnasp/
[19]  www.xlstat.com.
[20]  Czarnecka, A.M. and Bartnik, E. (2011) The Role of the Mitochondrial Genome in Ageing and Carcinogenesis. Journal of Aging Research, 2011, Article ID: 136435.
[21]  Suzuki, M., Toyooka, S., Miyajima, K., Iizasa, T., Fujisawa, T., Bekele, N.B. and Gazdar, A.F. (2003) Alterations in the Mitochondrial Displacement Loop in Lung Cancers. Clinical Cancer Research, 9, 5636-5641.
[22]  Klemba, A., Kowalewska, M. and Kukwa, W. (2010) Mitochondrial Genotype in Vulvar Carcinoma-Cuckoo in the Nest. Journal of Biomedical Science, 17, 73.
http://dx.doi.org/10.1186/1423-0127-17-73
[23]  Parrella, P., Seripa, D., Matera, M.G., Rabitti, C., Rinaldi, M., Mazzarelli, P., Gravina, C., Gallucci, M., Altomare, V., Flammia, G., Casalino, B., Benedetti-Panici, P.L. and Fazio, V.M. (2003) Mutations of the D310 Mitochondrial Mononucleotide Repeat in Primary Tumors and Cytological Specimens. Cancer Letters, 190, 73-77.
http://dx.doi.org/10.1016/S0304-3835(02)00578-5
[24]  Aral, C., Kaya, H., Ataizi-Celikel, C., Akkiprik, M., Sonmez, O., Gulluoglu, B.M. and Ozer, A. (2006) A Novel Approach for Rapid Screening of Mitochondrial D310 Polymorphism. BMC Cancer, 6, 21.
[25]  Xu, C., Tran-Thanh, D., Ma, C., May, K., Jung, J., Vecchiarelli, J. and Done, S.J. (2012) Mitochondrial D310 Mutations in the Early Development of Breast Cancer. British Journal of Cancer, 106, 1506-1511.
http://dx.doi.org/10.1038/bjc.2012.74
[26]  Santos Jr., G.C., Góoes, A.C., Vitto, H.D., Moreira, C.C., Avvad, E., Rumjanek, F.D. and Gallo, C.V. (2012) Genomic Instability at the 13q31 Locus and Somatic mtDNA Mutation in the D-Loop Site Correlate with Tumor Aggressiveness in Sporadic Brazilian Breast Cancer Cases. Clinics (Sao Paulo), 67, 1181-1190.
http://dx.doi.org/10.6061/clinics/2012(10)10
[27]  Yacoubi-Loueslati, B., Troudi, W., Baccar, A., Cherni, L., Ben Rhomdhane, K. and Ben Ammar Elgaaied, A. (2009) Polymorphism of the Mitochondrial Microsatellite 303-315 in Breast Cancer in Tunisia. Bulletin du Cancer, 96, 337- 342.
[28]  Kang, D., Miyako, K., Kai, Y., Irie, T. and Takeshige, K. (1997) In Vivo Determination of Replication Origins of Human Mitochondrial DNA by Ligation-Mediated Polymerase Chain Reaction. Journal of Biology and Chemistry, 272, 15275-15279.
http://dx.doi.org/10.1074/jbc.272.24.15275
[29]  Lee, D.Y. and Clayton, D.A. (1998) Initiation of Mitochondrial DNA Replication by Transcription and R-Loop Processing. Journal of Biology and Chemistry, 273, 30614-30621.
http://dx.doi.org/10.1074/jbc.273.46.30614
[30]  Jin, X., Zhang, J., Gao, Y., Ding, K., Wang, N., Zhou, D., Jen, J. and Cheng, S. (2007) Relationship between Mitochondrial DNA Mutations and Clinical Characteristics in Human Lung Cancer. Mitochondrion, 7, 347-353.
http://dx.doi.org/10.1016/j.mito.2007.06.003
[31]  Yu, M., Zhou, Y., Shi, Y., Ning, L., Yang, Y., Wei, X., Zhang, N., Hao, X. and Niu, R. (2007) Reduced Mitochondrial DNA Copy Number Is Correlated with Tumor Progression and Prognosis in Chinese Breast Cancer Patients. International Union of Biochemistry and Molecular Biology Life, 59, 450-457.
http://dx.doi.org/10.1080/15216540701509955
[32]  Chatterjee, A., Dasgupta, S. and Sidransky, D. (2011) Mitochondrial Subversion in Cancer. Cancer Prevention Research, 4, 638-654.
http://dx.doi.org/10.1158/1940-6207.CAPR-10-0326
[33]  Mambo, E., Gao, X., Cohen, Y., Guo, Z., Talalay, P. and Sidransky, D. (2003) Electrophile and Oxidant Damage of Mitochondrial DNA Leading to Rapid Evolution of Homoplasmic Mutations. Proceedings of the National Academy of Sciences of the United States of America, 100, 1838-1843.
http://dx.doi.org/10.1073/pnas.0437910100
[34]  Chen, A., Raule, N., Chomyn, A. and Attardi, G. (2012) Decreased Reactive Oxygen Species Production in Cells with Mitochondrial Haplogroups Associated with Longevity. PLoS ONE, 7, e46473.
http://dx.doi.org/10.1371/journal.pone.0046473
[35]  Lee, H.-C., Li, S.H., Lin, J.C., Wu, C.C., Yeh, D.C. and Wei, Y.-H. (2004) Somatic Mutations in the D-Loop and Decrease in the Copy Number of Mitochondrial DNA in Human Hepatocellular Carcinoma. Mutation Research, 547, 71- 78.
http://dx.doi.org/10.1016/j.mrfmmm.2003.12.011
[36]  Van Trappen, P.O., Cullup, T., Troke, R., Swann, D., Shepherd, J.H., Jacobs, I.J., Gayther, S.A. and Mein, C.A. (2007) Somatic Mitochondrial DNA Mutations in Primary and Metastatic Ovarian Cancer. Gynecologic Oncology, 104, 129- 133.
http://dx.doi.org/10.1016/j.ygyno.2006.07.010
[37]  Sharawat, S.K., Bakhshi, R., Vishnubhatla, S. and Bakhshi, S. (2010) Mitochondrial D-Loop Variations in Paediatric Acute Myeloid Leukaemia: A Potential Prognostic Marker. British Journal of Haematology, 149, 391-398.
http://dx.doi.org/10.1111/j.1365-2141.2010.08084.x
[38]  Chen, J.Z. and Kadlubar, F.F. (2004) Mitochondrial Mutagenesis and Oxidative Stress in Human Prostate Cancer. Journal of Environmental Science and Health, Part C: Environmental Carcinogenesis & Ecotoxicology Reviews, 22, 1- 12.
http://dx.doi.org/10.1081/GNC-120037931
[39]  Yoneyama, H., Hara, T., Kato, Y., Yamori, T., Matsuura, E.T. and Koike, K. (2005) Nucleotide Sequence Variation Is Frequent in the Mitochondrial DNA Displacement Loop Region of Individual Human Tumor Cells. Molecular Cancer Research, 3, 14-20.
[40]  Fliss, M.S., Usadel, H., Caballero, O.L., Wu, L., Buta, M.R., Eleff, S.M., Jen, J. and Sidransky, D. (2000) Facile Detection of Mitochondrial DNA Mutations in Tumors and Bodily Fluids. Science, 287, 2017-2019.
http://dx.doi.org/10.1126/science.287.5460.2017
[41]  Jerónimo, C., Nomoto, S., Caballero, O.L., Usadel, H., Henrique, R., Varzim, G., Oliveira, J., Lopes, C., Fliss, M.S. and Sidransky, D. (2001) Mitochondrial Mutations in Early Stage Prostate Cancer and Bodily Fluids. Oncogene, 20, 5195-5198.
http://dx.doi.org/10.1038/sj.onc.1204646
[42]  Zhu, W., Qin, W., Wessel, A., Puckett, C.L. and Sauter, E. (2005) Mitochondrial DNA Mutations in Breast Cancer Tissue and in Matched Nipple Aspirate Fluid. Carcinogenesis, 26, 145-152.
http://dx.doi.org/10.1093/carcin/bgh282
[43]  Wang, C., Zhang, F., Fan, H., Peng, L., Zhang, R., Liu, S. and Guo, Z. (2011) Sequence Polymorphisms of Mitochondrial D-Loop and Hepatocellular Carcinoma Outcome. Biochemical and Biophysical Research Communications, 406, 493-496.
http://dx.doi.org/10.1016/j.bbrc.2011.02.088
[44]  Zhai, K., Chang, L., Zhang, Q., Liu, B. and Wu, Y. (2011) Mitochondrial C150T Polymorphism Increases the Risk of Cervical Cancer and HPV Infection. Mitochondrion, 11, 559-563.
http://dx.doi.org/10.1016/j.mito.2011.02.005
[45]  Bai, R.K., Leal, S.M., Covarrubias, D., Liu, A. and Wong, L.J. (2007) Mitochondrial Genetic Background Modifies Breast Cancer Risk. Cancer Research, 67, 4687-4694.
http://dx.doi.org/10.1158/0008-5472.CAN-06-3554
[46]  Cann, R.L., Stoneking, M. and Wilson, A.C. (1987) Mitochondrial DNA and Human Evolution. Nature, 325, 31-36.
http://dx.doi.org/10.1038/325031a0
[47]  Excoffier, L. (2002) Human Demographic History: Refining the Recent African Origin Model. Current Opinion in Genetics and Development, 12, 675-682.
http://dx.doi.org/10.1016/S0959-437X(02)00350-7
[48]  Jakobsson, M., Scholz, S.W., Scheet, P., Gibbs, J.R., VanLiere, J.M., Fung, H.C., Szpiech, Z.A., Degnan, J.H., Wang, K., Guerreiro, R., Bras, J.M., Schymick, J.C., Hernandez, D.G., Traynor, B.J., Simon-Sanchez, J., Matarin, M., Britton, A., Van De Leemput, J., Rafferty, I., Bucan, M., Cann, H.M., Hardy, J.A., Rosenberg, N.A. and Singleton, A.B. (2008) Genotype, Haplotype and Copy-Number Variation in Worldwide Human Populations. Nature, 451, 998-1003.
http://dx.doi.org/10.1038/nature06742
[49]  Li, J.Z., Absher, D.M., Tang, H., Southwick, A.M., Casto, A.M., Ramachandran, S., Cann, H.M., Barsh, G.S., Feldman, M., Cavalli-Sforza, L.L. and Myers, R.M. (2008) Worldwide Human Relationships Inferred from Genome-Wide Patterns of Variation. Science, 319, 1100-1104.
http://dx.doi.org/10.1126/science.1153717
[50]  Torroni, A., Chen, Y.-S., Semino, O., Santachiara-Benerecetti, A.S., Scott, R.C., Lott, M.T., Winter, M. and Wallace D.C. (1994) Mitochondrial DNA and Y-Chromosome Polymorphisms in Four Native American Populations from Southern Mexico. The American Journal of Human Genetics, 54, 303-318.
[51]  Torroni, A., Lott, M.T., Cabell, M.F., Chen, Y.-S., Lavergne, L. and Wallace, D.C. (1994) Mitochondrial DNA and the Origin of Caucasians: Identification of Ancient Caucasian-Specific Haplogroups, One of Which Is Prone to a Recurrent Somatic Duplication in the D-Loop Region. The American Journal of Human Genetics, 55, 760-776.
[52]  Torroni, A., Miller, J.A., Moore, L.G., Zamudio, S., Zhuang, J., Droma, T. and Wallace, D.C. (1994) Mitochondrial DNA Analysis in Tibet. Implications for the Origin of the Tibetan Population and Its Adaptation to High Altitude. American Journal of Physical Anthropology, 93, 189-199.
http://dx.doi.org/10.1002/ajpa.1330930204
[53]  Torroni, A., Neel, J.V., Barrantes, R., Schurr, T.G. and Wallace, D.C. (1994) A Mitochondrial DNA “Clock” for the Amerinds and Its Implications for Timing Their Entry into North America. Proceedings of the National Academy of Sciences of the USA, 91, 1158-1162.
http://dx.doi.org/10.1073/pnas.91.3.1158
[54]  Poehlmann, A. and Roessner, A. (2010) Importance of DNA Damage Checkpoints in the Pathogenesis of Human Cancers. Pathology Research and Practice, 206, 591-601.
http://dx.doi.org/10.1016/j.prp.2010.06.006
[55]  Hanahan, D. and Weinberg, R.A. (2011) Hallmarks of Cancer: The Next Generation. Cell, 144, 646-674.
http://dx.doi.org/10.1016/j.cell.2011.02.013
[56]  Parent, G.J. (2008) Acclimatation thermique de la palourde américaine, Mercenaria mercenaria: Expérimentation en jardin commun. Mémoire Université du Québec à Rimouski, 76 p.
[57]  William, M. (2011) Diversité génétique et adaptation au milieu chez les arbres forestiers tropicaux: Etude chez le genre Virola (Myristicaceae). Thèse génétique écologique, Université des Antilles et de la Guyane, Guadeloupe, 178 p.
[58]  Bergeault, K. (2010) Identification de deux genes NPR1 chez les Vitaceae, analyse de leur diversite de sequences et interactions avec les facteurs de transcription VVTGA. Thèse, Universite de Haute-Alsace, Mulhouse, 173 p.
[59]  Razafindrazaka, H. (2010) Le peuplement humain de Madagascar: Anthropologie génétique de trois groupes traditionnels. Thèse Biotechnologie, Anthropobiologie, Université Toulouse III—Paul Sabatier, Toulouse, 277 p.
[60]  Mbaye, F. (2015) Le cancer du sein chez les femmes senegalaises: Impact de la variabilite nucleotidique et de l’instabilite de loci microsatellites. Thèse Génétique des Populations, Universite Cheikh Anta Diop de Dakar, Dakar, 131 p.

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