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Search Results: 1 - 10 of 308792 matches for " Elizabeth J. Johnson "
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The Role of Phytonutrients in Skin Health
Julie A. Evans,Elizabeth J. Johnson
Nutrients , 2010, DOI: 10.3390/nu2080903
Abstract: Photodamage is known to occur in skin with exposure to sunlight, specifically ultraviolet (UV) radiation. Such damage includes inflammation, oxidative stress, breakdown of the extracellular matrix, and development of cancer in the skin. Sun exposure is considered to be one of the most important risk factors for both nonmelanoma and melanoma skin cancers. Many phytonutrients have shown promise as photoprotectants in clinical, animal and cell culture studies. In part, the actions of these phytonutrients are thought to be through their actions as antioxidants. In regard to skin health, phytonutrients of interest include vitamin E, certain flavonoids, and the carotenoids, b-carotene, lycopene and lutein.
Should adjustment for covariates be used in prevalence estimations?
Li Wenjun,Stanek Edward J,Bertone-Johnson Elizabeth R
Epidemiologic Perspectives and Innovations , 2008, DOI: 10.1186/1742-5573-5-2
Abstract: Background Adjustment for covariates (also called auxiliary variables in survey sampling literature) is commonly applied in health surveys to reduce the variances of the prevalence estimators. In theory, adjusted prevalence estimators are more accurate when variance components are known. In practice, variance components needed to achieve the adjustment are unknown and their sample estimators are used instead. The uncertainty introduced by estimating variance components may overshadow the reduction in the variance of the prevalence estimators due to adjustment. We present empirical guidelines indicating when adjusted prevalence estimators should be considered, using gender adjusted and unadjusted smoking prevalence as an illustration. Methods We compare the accuracy of adjusted and unadjusted prevalence estimators via simulation. We simulate simple random samples from hypothetical populations with the proportion of males ranging from 30% to 70%, the smoking prevalence ranging from 15% to 35%, and the ratio of male to female smoking prevalence ranging from 1 to 4. The ranges of gender proportions and smoking prevalences reflect the conditions in 1999–2003 Behavioral Risk Factors Surveillance System (BRFSS) data for Massachusetts. From each population, 10,000 samples are selected and the ratios of the variance of the adjusted prevalence estimators to the variance of the unadjusted (crude) ones are computed and plotted against the proportion of males by population prevalence, as well as by population and sample sizes. The prevalence ratio thresholds, above which adjusted prevalence estimators have smaller variances, are determined graphically. Results In many practical settings, gender adjustment results in less accuracy. Whether or not there is better accuracy with adjustment depends on sample sizes, gender proportions and ratios between male and female prevalences. In populations with equal number of males and females and smoking prevalence of 20%, the adjusted prevalence estimators are more accurate when the ratios of male to female prevalences are above 2.4, 1.8, 1.6, 1.4 and 1.3 for sample sizes of 25, 50, 100, 150 and 200, respectively. Conclusion Adjustment for covariates will not result in more accurate prevalence estimator when ratio of male to female prevalences is close to one, sample size is small and risk factor prevalence is low. For example, when reporting smoking prevalence based on simple random sampling, gender adjustment is recommended only when sample size is greater than 200.
Soil Organic C:N vs. Water-Extractable Organic C:N  [PDF]
Richard L. Haney, Alan. J. Franzluebbers, Virginia. L. Jin, Mari-Vaughn. Johnson, Elizabeth. B. Haney, Mike. J. White, Robert. D. Harmel
Open Journal of Soil Science (OJSS) , 2012, DOI: 10.4236/ojss.2012.23032
Abstract: Traditionally, soil-testing laboratories have used a variety of methods to determine soil organic matter, yet they lack a practical method to predict potential N mineralization/immobilization from soil organic matter. Soils with high micro-bial activity may experience N immobilization (or reduced net N mineralization), and this issue remains unresolved in how to predict these conditions of net mineralization or net immobilization. Prediction may become possible with the use of a more sensitive method to determine soil C:N ratios stemming from the water-extractable C and N pools that can be readily adapted by both commercial and university soil testing labs. Soil microbial activity is highly related to soil organic C and N, as well as to water-extractable organic C (WEOC) and water-extractable organic N (WEON). The relationship between soil respiration and WEOC and WEON is stronger than between respiration and soil organic C (SOC) and total organic N (TON). We explored the relationship between soil organic C:N and water-extractable organic C:N, as well as their relationship to soil microbial activity as measured by the flush of CO2 following rewetting of dried soil. In 50 different soils, the relationship between soil microbial activity and water-extractable organic C:N was much stronger than for soil organic C: N. We concluded that the water-extractable organic C:N was a more sensitive measurement of the soil substrate which drives soil microbial activity. We also suggest that a water-extractable organic C:N level > 20 be used as a practical threshold to separate those soils that may have immobilized N with high microbial activity.
Analysis Methods for the Determination of Anthropogenic Additions of P to Agricultural Soils  [PDF]
Richard L. Haney, Virginia L. Jin, Mari-Vaughn V. Johnson, Elizabeth B. Haney, R. Daren Harmel, Jeffrey G. Arnold, Michael J. White
Open Journal of Soil Science (OJSS) , 2015, DOI: 10.4236/ojss.2015.52007

Phosphorus loading and measurement is of concern on lands where biosolids have been applied. Traditional soil testing for plant-available P may be inadequate for the accurate assessment of P loadings in a regulatory environment as the reported levels may not correlate well with environmental risk. In order to accurately assess potential P runoff and leaching, as well as plant uptake, we must be able to measure organic P mineralized by the biotic community in the soil. Soils with varying rates of biosolid application were evaluated for mineralized organic P during a 112-day incubation using the difference between P measured using a rapid-flow analyzer (RFA) and an axial flow Varian ICP-OES. An increase in the P mineralized from the treated soils was observed from analysis with the Varian ICP-OES, but not with the RFA. These results confirm that even though organic P concentrations have increased due to increasing biosolid application, traditional soil testing using an RFA for detection, would not accurately portray P concentration and potential P loading from treated soils.

The Impact of Schistosoma japonicum Infection and Treatment on Ultrasound-Detectable Morbidity: A Five-Year Cohort Study in Southwest China
Elizabeth J. Carlton ,Michelle Hsiang,Yi Zhang,Sarah Johnson,Alan Hubbard,Robert C. Spear
PLOS Neglected Tropical Diseases , 2010, DOI: 10.1371/journal.pntd.0000685
Abstract: Background Ultrasonography allows for non-invasive examination of the liver and spleen and can further our understanding of schistosomiasis morbidity. Methodology/Principal Findings We followed 578 people in Southwest China for up to five years. Participants were tested for Schistosoma japonicum infection in stool and seven standard measures of the liver and spleen were obtained using ultrasound to evaluate the relationship between schistosomiasis infection and ultrasound-detectable pathology, and the impact of targeted treatment on morbidity. Parenchymal fibrosis, a network pattern of the liver unique to S. japonicum, was associated with infection at the time of ultrasound (OR 1.40, 95% CI: 1.03–1.90) and infection intensity (test for trend, p = 0.002), adjusting for age, sex and year, and more strongly associated with prior infection status and intensity (adjusted OR 1.84, 95% CI: 1.30–2.60; test for trend: p<0.001 respectively), despite prompt treatment of infections. While declines in parenchymal fibrosis over time were statistically significant, only 28% of individuals with severe parenchymal fibrosis (grades 2 or 3) at enrollment reversed to normal or grade 1 within five years. Other liver abnormalities were less consistently associated with S. japonicum infection. Conclusions/Significance Parenchymal fibrosis is an appropriate measure of S. japonicum morbidity and can document reductions in disease following control efforts. Other ultrasound measures may have limited epidemiological value in regions with similar infection levels. Because severe fibrosis may not reverse quickly following treatment, efforts to reduce exposure to S. japonicum should be considered in combination with treatment to prevent schistosomiasis morbidity.
Regulation of the let-7a-3 Promoter by NF-κB
David J. Wang, Aster Legesse-Miller, Elizabeth L. Johnson, Hilary A. Coller
PLOS ONE , 2012, DOI: 10.1371/journal.pone.0031240
Abstract: Changes in microRNA expression have been linked to a wide array of pathological states. However, little is known about the regulation of microRNA expression. The let-7 microRNA is a tumor suppressor that inhibits cellular proliferation and promotes differentiation, and is frequently lost in tumors. We investigated the transcriptional regulation of two let-7 family members, let-7a-3 and let-7b, which form a microRNA cluster and are located 864 bp apart on chromosome 22q13.31. Previous reports present conflicting data on the role of the NF-κB transcription factor in regulating let-7. We cloned three fragments upstream of the let-7a-3/let-7b miRNA genomic region into a plasmid containing a luciferase reporter gene. Ectopic expression of subunits of NF-κB (p50 or p65/RelA) significantly increased luciferase activity in HeLa, 293, 293T and 3T3 cells, indicating that the let-7a-3/let-7b promoter is highly responsive to NF-κB. Mutation of a putative NF-κB binding site at bp ?833 reduced basal promoter activity and decreased promoter activity in the presence of p50 or p65 overexpression. Mutation of a second putative binding site, at bp ?947 also decreased promoter activity basally and in response to p65 induction, indicating that both sites contribute to NF-κB responsiveness. While the levels of the endogenous primary let-7a and let-7b transcript were induced in response to NF-κB overexpression in 293T cells, the levels of fully processed, mature let-7a and let-7b miRNAs did not increase. Instead, levels of Lin-28B, a protein that blocks let-7 maturation, were induced by NF-κB. Increased Lin-28B levels could contribute to the lack of an increase in mature let-7a and let-7b. Our results suggest that the final biological outcome of NF-κB activation on let-7 expression may vary depending upon the cellular context. We discuss our results in the context of NF-κB activity in repressing self-renewal and promoting differentiation.
The Arrowhead Ministernotomy with Rigid Sternal Plate Fixation: A Minimally Invasive Approach for Surgery of the Ascending Aorta and Aortic Root
Mark J. Russo,John Gnezda,Aurelie Merlo,Elizabeth M. Johnson,Mohammad Hashmi,Jaishankar Raman
Minimally Invasive Surgery , 2014, DOI: 10.1155/2014/681371
Abstract: Background. Ministernotomy incisions have been increasingly used in a variety of settings. We describe a novel approach to ministernotomy using arrowhead incision and rigid sternal fixation with a standard sternal plating system. Methods. A small, midline, vertical incision is made from the midportion of the manubrium to a point just above the 4th intercostal mark. The sternum is opened in the shape of an inverted T using two oblique horizontal incisions from the midline to the sternal edges. At the time of chest closure, the three bony segments are aligned and approximated, and titanium plates (Sternalock, Jacksonville, Florida) are used to fix the body of the sternum back together. Results. This case series includes 11 patients who underwent arrowhead ministernotomy with rigid sternal plate fixation for aortic surgery. The procedures performed were axillary cannulation (), aortic root replacement (), valve sparing root replacement (), and replacement of the ascending aorta () and/or hemiarch (). Thirty-day mortality was 0%; there were no conversions, strokes, or sternal wound infections. Conclusions. Arrowhead ministernotomy with rigid sternal plate fixation is an adequate minimally invasive approach for surgery of the ascending aorta and aortic root. 1. Introduction Ministernotomy incisions have been increasingly used in a variety of cardiac surgery settings in an attempt to reduce surgical trauma and hasten patient recovery [1–5]. One of the first described ministernotomy techniques was the T incision [6]. However, despite offering superior exposure, that technique has been avoided after reports of poor healing of the transverse portion [7]. Currently, the J incision technique is the most widely used, although this technique limits exposure. Other less common techniques, such as the “upper V-type” ministernotomy in the second intercostal space, also involve limited exposure [8]. Here we describe a novel approach to ministernotomy by employing two simple but, in our experience, important modifications to the T incision technique. Firstly, the horizontal limb of the inverted T sternotomy is altered to an arrowhead shape. Secondly, rigid sternal fixation by a standard sternal plating system is used to maximize exposure, while limiting risk of sternal complications. 2. Methods 2.1. Preoperative Assessment Preoperatively, a CT scan is obtained to assess relative location of the aorta to the sternum. If the aortic root is lower than the 4th intercostal space, we favor a full sternotomy. 2.2. Procedure A small vertical skin incision is made from the
Leucine-Rich Repeat Kinase 2 (LRRK2)-Deficient Rats Exhibit Renal Tubule Injury and Perturbations in Metabolic and Immunological Homeostasis
Daniel Ness, Zhao Ren, Shyra Gardai, Douglas Sharpnack, Victor J. Johnson, Richard J. Brennan, Elizabeth F. Brigham, Andrew J. Olaharski
PLOS ONE , 2013, DOI: 10.1371/journal.pone.0066164
Abstract: Genetic evidence links mutations in the LRRK2 gene with an increased risk of Parkinson’s disease, for which no neuroprotective or neurorestorative therapies currently exist. While the role of LRRK2 in normal cellular function has yet to be fully described, evidence suggests involvement with immune and kidney functions. A comparative study of LRRK2-deficient and wild type rats investigated the influence that this gene has on the phenotype of these rats. Significant weight gain in the LRRK2 null rats was observed and was accompanied by significant increases in insulin and insulin-like growth factors. Additionally, LRRK2-deficient rats displayed kidney morphological and histopathological alterations in the renal tubule epithelial cells of all animals assessed. These perturbations in renal morphology were accompanied by significant decreases of lipocalin-2, in both the urine and plasma of knockout animals. Significant alterations in the cellular composition of the spleen between LRRK2 knockout and wild type animals were identified by immunophenotyping and were associated with subtle differences in response to dual infection with rat-adapted influenza virus (RAIV) and Streptococcus pneumoniae. Ontological pathway analysis of LRRK2 across metabolic and kidney processes and pathological categories suggested that the thioredoxin network may play a role in perturbing these organ systems. The phenotype of the LRRK2 null rat is suggestive of a complex biology influencing metabolism, immune function and kidney homeostasis. These data need to be extended to better understand the role of the kinase domain or other biological functions of the gene to better inform the development of pharmacological inhibitors.
Identification of the Eph receptor pathway as a novel target for eicosapentaenoic acid (EPA) modification of gene expression in human colon adenocarcinoma cells (HT-29)
Joanne F Doleman, John J Eady, Ruan M Elliott, Rob J Foxall, John Seers, Ian T Johnson, Elizabeth K Lund
Nutrition & Metabolism , 2010, DOI: 10.1186/1743-7075-7-56
Abstract: We used microarrays to assess the effects on gene expression in HT29 colon adenocarcinoma cells of exposure to the n-3 fatty acid eicosapentaenoic acid (EPA). HT29 cells were cultured with EPA (150 μM) for up to 24 hr prior to harvesting and isolation of RNA. Microarray results were analyzed within the statistical package 'R', and GeneGo MetaCore was used to identify key pathways of altered gene expression.EphB4, Vav2 and EphA1 gene expression were identified as significantly altered by EPA treatment. Statistically significant changes in gene expression after HT29 exposure to EPA were confirmed in a second experiment by real-time RT-PCR (TaqMan), This experiment also compared the effects of exposure to EPA to arachadonic acid (AA, n-6). Corresponding changes in protein expression were also assessed by Western blotting.Eph receptor mediated signaling is an entirely novel signaling pathway through which EPA may promote a wide range of health benefits, in particular in relation to reduction of colorectal cancer progression.Polyunsaturated fatty acids (PUFAs), and in particular those of the n-3 series found in fish oil, are well recognized to have a wide range of health benefits [1]. However the mechanisms by which they mediate their beneficial physiological effects at the cell signaling level are still poorly understood. The importance of PUFAs in modulating cell function via control of gene transcription has been recognized for over a decade [2]. The potential complexity of the various signaling mechanisms involved when cells are exposed to PUFAs is discussed in a review by Tang et al. [3]. For example they, and the wide range of signaling molecules derived from them, act as ligands to PPARs. They may also change the fluidity of cell membranes and thus influence receptor activity, and they can also modify the redox state, which in turn will influence a wide range of signaling pathways. It is entirely feasible to raise plasma and tissue fatty acids to levels which have
Evanescent-Wave Bonding Between Optical Waveguides
Michelle L. Povinelli,Marko Loncar,Mihai Ibanescu,Elizabeth J. Smythe,Steven G. Johnson,Federico Capasso,J. D. Joannopoulos
Physics , 2005, DOI: 10.1364/OL.30.003042
Abstract: Forces arising from overlap between the guided waves of parallel, microphotonic waveguides are calculated. Both attractive and repulsive forces, determined by the choice of relative input phase, are found. Using realistic parameters for a silicon-on-insulator material system, we estimate that the forces are large enough to cause observable displacements. Our results illustrate the potential for a broader class of optically-tunable microphotonic devices and microstructured artificial materials.
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